AMPlify is an attentive deep learning model for antimicrobial peptide prediction.
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
faa
:file
amino acid sequences fasta
*.{fa,fa.gz,faa,faa.gz,fasta,fasta.gz}
model_dir
:directory
Directory of where models are stored (optional)
tsv
*.tsv
amino acid sequences with prediction (AMP, non-AMP) and probability scores
*.{tsv}
versions_amplify
${task.process}
:string
The name of the process
AMPlify
The name of the tool
AMPlify --help 2>&1 | sed -n 's/AMPlify v//p'
:eval
The expression to obtain the version of the tool
versions
Attentive deep learning model for antimicrobial peptide prediction
