- OverviewSet up your environment
- NextflowInstall Nextflow
- Software dependenciesManage software dependencies
- nf-core toolsInstall nf-core/tools
- VS CodeInstall VS Code and extensions
- Dev ContainersUse and create Dev Containers
- PrettierMaintain consistent code style
- TroubleshootingTroubleshoot common issues
Get started
New to nf-core? Start here to learn the basics and run your first pipeline.
What is nf-core?
- What is nf-core?Learn about nf-core
Environment setup
Run your first pipeline
- Run your first pipelineRun your first pipeline